[PATCH v3] erofs-utils: mkfs: support fragment deduplication

Yue Hu zbestahu at gmail.com
Tue Nov 29 21:00:53 AEDT 2022


From: Yue Hu <huyue2 at coolpad.com>

Previously, there's no fragment deduplication when this feature is
introduced. Let's support it now.

With this patch, for Linux 5.10.1 + 5.10.87 source code:

[before]
 32k pcluster + lz4hc,12 + fragment		454M
 64k pcluster + lz4hc,12 + fragment		439M
128k pcluster + lz4hc,12 + fragment		431M
 32k pcluster + lz4hc,12 + fragment + dedupe	376M
 64k pcluster + lz4hc,12 + fragment + dedupe	384M
128k pcluster + lz4hc,12 + fragment + dedupe	399M

[after]
 32k pcluster + lz4hc,12 + fragment		316M
 64k pcluster + lz4hc,12 + fragment		300M
128k pcluster + lz4hc,12 + fragment		292M
 32k pcluster + lz4hc,12 + fragment + dedupe	291M
 64k pcluster + lz4hc,12 + fragment + dedupe	286M
128k pcluster + lz4hc,12 + fragment + dedupe	283M

Suggested-by: Gao Xiang <hsiangkao at linux.alibaba.com>
Signed-off-by: Yue Hu <huyue2 at coolpad.com>
---
v3: 
- modify acrroding to Xiang's comments in v2
- simplify the logic in vle_compress_one
- fix the crash for 1MB pcluster

v2: mainly improve the logic in compression

 include/erofs/fragments.h |   3 +-
 lib/compress.c            | 115 ++++++++++++++++++++----
 lib/fragments.c           | 180 +++++++++++++++++++++++++++++++++++++-
 3 files changed, 277 insertions(+), 21 deletions(-)

diff --git a/include/erofs/fragments.h b/include/erofs/fragments.h
index 5444384..6c51fc9 100644
--- a/include/erofs/fragments.h
+++ b/include/erofs/fragments.h
@@ -15,8 +15,9 @@ extern "C"
 extern const char *frags_packedname;
 #define EROFS_PACKED_INODE	frags_packedname
 
+int z_erofs_fragments_dedupe(struct erofs_inode *inode, int fd, u32 *crc);
 int z_erofs_pack_fragments(struct erofs_inode *inode, void *data,
-			   unsigned int len);
+			   unsigned int len, u32 crc);
 struct erofs_inode *erofs_mkfs_build_fragments(void);
 int erofs_fragments_init(void);
 void erofs_fragments_exit(void);
diff --git a/lib/compress.c b/lib/compress.c
index 17b3213..7e01932 100644
--- a/lib/compress.c
+++ b/lib/compress.c
@@ -33,6 +33,10 @@ struct z_erofs_vle_compress_ctx {
 	unsigned int head, tail;
 	erofs_blk_t blkaddr;		/* pointing to the next blkaddr */
 	u16 clusterofs;
+
+	u32 crc;
+	unsigned int pclustersize;
+	erofs_off_t remaining;
 };
 
 #define Z_EROFS_LEGACY_MAP_HEADER_SIZE	\
@@ -162,10 +166,10 @@ static void z_erofs_write_indexes(struct z_erofs_vle_compress_ctx *ctx)
 	ctx->clusterofs = clusterofs + count;
 }
 
-static int z_erofs_compress_dedupe(struct erofs_inode *inode,
-				   struct z_erofs_vle_compress_ctx *ctx,
+static int z_erofs_compress_dedupe(struct z_erofs_vle_compress_ctx *ctx,
 				   unsigned int *len)
 {
+	struct erofs_inode *inode = ctx->inode;
 	int ret = 0;
 
 	do {
@@ -319,30 +323,62 @@ static void tryrecompress_trailing(void *in, unsigned int *insize,
 	*compressedsize = ret;
 }
 
-static int vle_compress_one(struct z_erofs_vle_compress_ctx *ctx,
-			    bool final)
+static void z_erofs_fragments_dedupe_update(struct z_erofs_vle_compress_ctx *ctx,
+					    unsigned int *len)
+{
+	struct erofs_inode *inode = ctx->inode;
+	const unsigned int remaining = ctx->remaining + *len;
+
+	DBG_BUGON(!inode->fragment_size);
+
+	/* try to close the gap if it gets larger (should be rare) */
+	if (inode->fragment_size < remaining) {
+		ctx->pclustersize = roundup(remaining - inode->fragment_size,
+					    EROFS_BLKSIZ);
+		return;
+	}
+
+	inode->fragmentoff += inode->fragment_size - remaining;
+	inode->fragment_size = remaining;
+
+	erofs_dbg("Reducing fragment size to %u at %lu",
+		  inode->fragment_size, inode->fragmentoff);
+
+	/* it's ending */
+	ctx->head += remaining;
+	ctx->remaining = 0;
+	*len = 0;
+}
+
+static int vle_compress_one(struct z_erofs_vle_compress_ctx *ctx, bool fixup)
 {
 	static char dstbuf[EROFS_CONFIG_COMPR_MAX_SZ + EROFS_BLKSIZ];
 	struct erofs_inode *inode = ctx->inode;
 	char *const dst = dstbuf + EROFS_BLKSIZ;
 	struct erofs_compress *const h = &compresshandle;
 	unsigned int len = ctx->tail - ctx->head;
+	bool final = !ctx->remaining;
 	int ret;
 
 	while (len) {
-		unsigned int pclustersize =
-			z_erofs_get_max_pclusterblks(inode) * EROFS_BLKSIZ;
 		bool may_inline = (cfg.c_ztailpacking && final);
 		bool may_packing = (cfg.c_fragments && final &&
 				   !erofs_is_packed_inode(inode));
 
-		if (z_erofs_compress_dedupe(inode, ctx, &len) && !final)
+		if (z_erofs_compress_dedupe(ctx, &len) && !final)
 			break;
 
-		if (len <= pclustersize) {
+		if (len <= ctx->pclustersize) {
 			if (!final || !len)
 				break;
 			if (may_packing) {
+				if (inode->fragment_size && !fixup) {
+					ctx->remaining = inode->fragment_size;
+					ctx->pclustersize =
+						roundup(len, EROFS_BLKSIZ);
+					ctx->e.length = 0;
+					return -EAGAIN;
+				}
 				ctx->e.length = len;
 				goto frag_packing;
 			}
@@ -353,7 +389,7 @@ static int vle_compress_one(struct z_erofs_vle_compress_ctx *ctx,
 		ctx->e.length = min(len,
 				cfg.c_max_decompressed_extent_bytes);
 		ret = erofs_compress_destsize(h, ctx->queue + ctx->head,
-				&ctx->e.length, dst, pclustersize,
+				&ctx->e.length, dst, ctx->pclustersize,
 				!(final && len == ctx->e.length));
 		if (ret <= 0) {
 			if (ret != -EAGAIN) {
@@ -385,11 +421,12 @@ nocompression:
 			ctx->e.compressedblks = 1;
 			ctx->e.raw = true;
 		} else if (may_packing && len == ctx->e.length &&
-			   ret < pclustersize) {
+			   ret < ctx->pclustersize && (!inode->fragment_size ||
+			   fixup)) {
 frag_packing:
 			ret = z_erofs_pack_fragments(inode,
 						     ctx->queue + ctx->head,
-						     len);
+						     len, ctx->crc);
 			if (ret < 0)
 				return ret;
 			ctx->e.compressedblks = 0; /* indicate a fragment */
@@ -425,6 +462,21 @@ frag_packing:
 			DBG_BUGON(ctx->e.compressedblks * EROFS_BLKSIZ >=
 				  ctx->e.length);
 
+			/*
+			 * Try to recompress a litte more if there's space left
+			 * for fragment deduplication.
+			 */
+			if (may_packing && len == ctx->e.length && tailused &&
+			    ctx->tail < sizeof(ctx->queue)) {
+				DBG_BUGON(!inode->fragment_size);
+
+				ctx->remaining = inode->fragment_size;
+				ctx->pclustersize =
+					ctx->e.compressedblks * EROFS_BLKSIZ;
+				ctx->e.length = 0;
+				return -EAGAIN;
+			}
+
 			/* zero out garbage trailing data for non-0padding */
 			if (!erofs_sb_has_lz4_0padding())
 				memset(dst + ret, 0,
@@ -454,6 +506,9 @@ frag_packing:
 		ctx->head += ctx->e.length;
 		len -= ctx->e.length;
 
+		if (fixup && ctx->e.compressedblks)
+			z_erofs_fragments_dedupe_update(ctx, &len);
+
 		if (!final && ctx->head >= EROFS_CONFIG_COMPR_MAX_SZ) {
 			const unsigned int qh_aligned =
 				round_down(ctx->head, EROFS_BLKSIZ);
@@ -736,10 +791,9 @@ int erofs_write_compressed_file(struct erofs_inode *inode, int fd)
 {
 	struct erofs_buffer_head *bh;
 	static struct z_erofs_vle_compress_ctx ctx;
-	erofs_off_t remaining;
 	erofs_blk_t blkaddr, compressed_blocks;
 	unsigned int legacymetasize;
-	int ret;
+	int ret = 0;
 	u8 *compressmeta = malloc(vle_compressmeta_capacity(inode->i_size));
 
 	if (!compressmeta)
@@ -775,6 +829,16 @@ int erofs_write_compressed_file(struct erofs_inode *inode, int fd)
 	inode->idata_size = 0;
 	inode->fragment_size = 0;
 
+	/*
+	 * Dedupe fragments before compression to avoid writing duplicate parts
+	 * into packed inode.
+	 */
+	if (cfg.c_fragments && !erofs_is_packed_inode(inode)) {
+		ret = z_erofs_fragments_dedupe(inode, fd, &ctx.crc);
+		if (ret < 0)
+			goto err_bdrop;
+	}
+
 	blkaddr = erofs_mapbh(bh->block);	/* start_blkaddr */
 	ctx.inode = inode;
 	ctx.blkaddr = blkaddr;
@@ -782,22 +846,25 @@ int erofs_write_compressed_file(struct erofs_inode *inode, int fd)
 	ctx.head = ctx.tail = 0;
 	ctx.clusterofs = 0;
 	ctx.e.length = 0;
-	remaining = inode->i_size;
+	ctx.e.compressedblks = 0;
+	ctx.pclustersize = z_erofs_get_max_pclusterblks(inode) * EROFS_BLKSIZ;
+	ctx.remaining = inode->i_size - inode->fragment_size;
 
-	while (remaining) {
-		const u64 readcount = min_t(u64, remaining,
+	while (ctx.remaining) {
+		const u64 readcount = min_t(u64, ctx.remaining,
 					    sizeof(ctx.queue) - ctx.tail);
+		bool fixup = ret < 0;
 
 		ret = read(fd, ctx.queue + ctx.tail, readcount);
 		if (ret != readcount) {
 			ret = -errno;
 			goto err_bdrop;
 		}
-		remaining -= readcount;
+		ctx.remaining -= readcount;
 		ctx.tail += readcount;
 
-		ret = vle_compress_one(&ctx, !remaining);
-		if (ret)
+		ret = vle_compress_one(&ctx, fixup);
+		if (ret && ret != -EAGAIN)
 			goto err_free_idata;
 	}
 	DBG_BUGON(ctx.head != ctx.tail);
@@ -807,6 +874,16 @@ int erofs_write_compressed_file(struct erofs_inode *inode, int fd)
 	DBG_BUGON(compressed_blocks < !!inode->idata_size);
 	compressed_blocks -= !!inode->idata_size;
 
+	if (inode->fragment_size && ctx.e.compressedblks) {
+		z_erofs_write_indexes(&ctx);
+
+		inode->z_advise |= Z_EROFS_ADVISE_FRAGMENT_PCLUSTER;
+		ctx.e.length = inode->fragment_size;
+		ctx.e.compressedblks = 0;
+		ctx.e.raw = true;
+		ctx.e.partial = false;
+		ctx.e.blkaddr = ctx.blkaddr;
+	}
 	z_erofs_write_indexes(&ctx);
 	z_erofs_write_indexes_final(&ctx);
 	legacymetasize = ctx.metacur - compressmeta;
diff --git a/lib/fragments.c b/lib/fragments.c
index b8c37d5..48c133f 100644
--- a/lib/fragments.c
+++ b/lib/fragments.c
@@ -10,14 +10,183 @@
 #include "erofs/inode.h"
 #include "erofs/compress.h"
 #include "erofs/print.h"
+#include "erofs/internal.h"
 #include "erofs/fragments.h"
 
+struct erofs_fragment_dedupe_item {
+	struct list_head	list;
+	unsigned int		length, nr_dup;
+	erofs_off_t		pos;
+	u8			data[];
+};
+
+#define FRAGMENT_HASHTABLE_SIZE		65536
+#define FRAGMENT_HASH(crc)		(crc & (FRAGMENT_HASHTABLE_SIZE - 1))
+
+static struct list_head dupli_frags[FRAGMENT_HASHTABLE_SIZE];
+static unsigned int len_to_hash; /* the fragment length for crc32 hash */
+
 static FILE *packedfile;
 const char *frags_packedname = "packed_file";
 
+static int z_erofs_fragments_dedupe_find(struct erofs_inode *inode, int fd,
+					 u32 crc)
+{
+	struct erofs_fragment_dedupe_item *cur, *di = NULL;
+	struct list_head *head;
+	u8 *data;
+	unsigned int length;
+	int ret;
+
+	head = &dupli_frags[FRAGMENT_HASH(crc)];
+	if (list_empty(head))
+		return 0;
+
+	/* XXX: no need to read so much for smaller? */
+	if (inode->i_size < 2 * EROFS_CONFIG_COMPR_MAX_SZ)
+		length = inode->i_size;
+	else
+		length = 2 * EROFS_CONFIG_COMPR_MAX_SZ;
+
+	data = malloc(length);
+	if (!data)
+		return -ENOMEM;
+
+	ret = lseek(fd, inode->i_size - length, SEEK_SET);
+	if (ret == -1) {
+		ret = -errno;
+		goto out;
+	}
+
+	ret = read(fd, data, length);
+	if (ret != length) {
+		ret = -errno;
+		goto out;
+	}
+
+	list_for_each_entry(cur, head, list) {
+		unsigned int e1, e2, i = 0;
+
+		DBG_BUGON(cur->length < len_to_hash + 1);
+		DBG_BUGON(length < len_to_hash + 1);
+
+		e1 = cur->length - len_to_hash - 1;
+		e2 = length - len_to_hash - 1;
+
+		if (memcmp(cur->data + e1 + 1, data + e2 + 1, len_to_hash))
+			continue;
+
+		while (i <= min(e1, e2) && cur->data[e1 - i] == data[e2 - i])
+			i++;
+
+		if (i && (!di || i + len_to_hash > di->nr_dup)) {
+			cur->nr_dup = i + len_to_hash;
+			di = cur;
+
+			/* full match */
+			if (i == min(e1, e2) + 1)
+				break;
+		}
+	}
+	if (!di)
+		goto out;
+
+	DBG_BUGON(di->length < di->nr_dup);
+
+	inode->fragment_size = di->nr_dup;
+	inode->fragmentoff = di->pos + di->length - di->nr_dup;
+
+	erofs_dbg("Dedupe %u fragment data at %lu", inode->fragment_size,
+		  inode->fragmentoff);
+out:
+	free(data);
+	return ret;
+}
+
+
+int z_erofs_fragments_dedupe(struct erofs_inode *inode, int fd, u32 *crc_ret)
+{
+	u8 data_to_hash[len_to_hash];
+	u32 crc;
+	int ret;
+
+	if (inode->i_size <= len_to_hash)
+		return 0;
+
+	ret = lseek(fd, inode->i_size - len_to_hash, SEEK_SET);
+	if (ret == -1)
+		return -errno;
+
+	ret = read(fd, data_to_hash, len_to_hash);
+	if (ret != len_to_hash)
+		return -errno;
+
+	crc = erofs_crc32c(~0, data_to_hash, len_to_hash);
+	*crc_ret = crc;
+
+	ret = z_erofs_fragments_dedupe_find(inode, fd, crc);
+	if (ret < 0)
+		return ret;
+
+	ret = lseek(fd, 0, SEEK_SET);
+	if (ret == -1)
+		return -errno;
+	return 0;
+}
+
+static int z_erofs_fragments_dedupe_insert(void *data, unsigned int len,
+					   erofs_off_t pos, u32 crc)
+{
+	struct erofs_fragment_dedupe_item *di;
+
+	if (len <= len_to_hash)
+		return 0;
+
+	di = malloc(sizeof(*di) + len);
+	if (!di)
+		return -ENOMEM;
+
+	memcpy(di->data, data, len);
+	di->length = len;
+	di->pos = pos;
+	di->nr_dup = 0;
+
+	list_add_tail(&di->list, &dupli_frags[FRAGMENT_HASH(crc)]);
+	return 0;
+}
+
+static inline void z_erofs_fragments_dedupe_init(unsigned int clen)
+{
+	unsigned int i;
+
+	for (i = 0; i < FRAGMENT_HASHTABLE_SIZE; ++i)
+		init_list_head(&dupli_frags[i]);
+
+	len_to_hash = clen;
+}
+
+static void z_erofs_fragments_dedupe_exit(void)
+{
+	struct erofs_fragment_dedupe_item *di, *n;
+	struct list_head *head;
+	unsigned int i;
+
+	for (i = 0; i < FRAGMENT_HASHTABLE_SIZE; ++i) {
+		head = &dupli_frags[i];
+
+		if (list_empty(head))
+			continue;
+
+		list_for_each_entry_safe(di, n, head, list)
+			free(di);
+	}
+}
+
 int z_erofs_pack_fragments(struct erofs_inode *inode, void *data,
-			   unsigned int len)
+			   unsigned int len, u32 crc)
 {
+	int ret;
+
 	inode->z_advise |= Z_EROFS_ADVISE_FRAGMENT_PCLUSTER;
 	inode->fragmentoff = ftell(packedfile);
 	inode->fragment_size = len;
@@ -35,6 +204,11 @@ int z_erofs_pack_fragments(struct erofs_inode *inode, void *data,
 
 	erofs_dbg("Recording %u fragment data at %lu", inode->fragment_size,
 		  inode->fragmentoff);
+
+	ret = z_erofs_fragments_dedupe_insert(data, len, inode->fragmentoff,
+					      crc);
+	if (ret)
+		return ret;
 	return len;
 }
 
@@ -50,6 +224,8 @@ void erofs_fragments_exit(void)
 {
 	if (packedfile)
 		fclose(packedfile);
+
+	z_erofs_fragments_dedupe_exit();
 }
 
 int erofs_fragments_init(void)
@@ -61,5 +237,7 @@ int erofs_fragments_init(void)
 #endif
 	if (!packedfile)
 		return -ENOMEM;
+
+	z_erofs_fragments_dedupe_init(16);
 	return 0;
 }
-- 
2.17.1



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